MHC II Automated Server Benchmarks
Accumulated overall ranking scores
Ranking scores based on data sets submitted to the IEDB for the last at least 5 references.
| Server | 2019-03-22 | 2018-11-23 | 2017-12-29 | 2017-11-24 | 2017-08-18 | 2017-06-30 | 2017-04-28 | 2017-04-11 | 2016-12-31 |
| NetMHCIIpan-3.1 | 83 | 79 | 76 | 72 | 68 | 66 | 83 | - | - |
| Consensus IEDB method | 65 | 65 | 63 | 64 | 63 | 63 | 50 | 50 | 51 |
| NN-align | 57 | 64 | 66 | 65 | 68 | 63 | 72 | 72 | 65 |
| SMM-align | 55 | 42 | 38 | 45 | 46 | 36 | 43 | 46 | 46 |
| Tepitope (Sturniolo) | 18 | 41 | 45 | 45 | 43 | 60 | 15 | 17 | 25 |
| Comblib matrices | 10 | 4 | 0 | 0 | 0 | 0 | 13 | 6 | 15 |
Weekly ranking scores
Ranking scores based on data sets submitted to the IEDB within a single week.
| Server | 2019-03-22 | 2018-11-23 | 2017-12-29 | 2017-11-24 | 2017-08-18 | 2017-06-30 | 2017-04-28 | 2017-04-11 | 2016-12-31 |
| NetMHCIIpan-3.1 | 83 | 90 | 67 | 100 | 75 | 75 | 25 | 56 | - |
| Consensus IEDB method | 57 | 90 | 83 | 50 | 75 | 60 | 100 | 56 | 51 |
| NN-align | 53 | 60 | 67 | 40 | 75 | 69 | 50 | 50 | 65 |
| SMM-align | 53 | 40 | 0 | 90 | 100 | 26 | 75 | 50 | 46 |
| Tepitope (Sturniolo) | 15 | 10 | - | 60 | 0 | 52 | - | 100 | 25 |
| Comblib matrices | - | 20 | - | 0 | - | 0 | - | 0 | 15 |
Download initial benchmark datasets
Click here to download the initial benchmark datasets.