MHC-I Binding Predictions

Prediction Method Version	2013-02-22 [Older versions]
Specify Sequence(s)
Enter protein sequence(s) in FASTA format or as whitespace-separated sequences. (Browse for sequences in NCBI)
Or select file containing sequence(s)
Choose sequence format	auto detect format Space separated sequences One sequence (ignores spaces) FASTA format
Choose a Prediction Method
Prediction Method Show all the method versions:	IEDB recommended 2.19 IEDB recommended 2.18 Consensus netMHCpan 4.0 netMHCpan 2.8 netMHCpan 3.0 ANN 4.0 ANN 3.4 SMMPMBEC SMM CombLib_Sidney2008 PickPocket netMHCcons netMHCstabpan Help on prediction method selections
Specify what to make binding predictions for
MHC source species
Show only frequently occuring alleles: Select MHC allele(s) (Specify MHC allele sequence) Select HLA allele reference set:	Allele Length Upload allele file Paste a single full length MHC protein sequence in FASTA format: Peptide length: --choose-- 8 9 10 11 12 13 14
Specify Output
Sort peptides by
Show	All predictions IC50 below [cutoff] nM Percent rank below [cutoff] cutoff
Output format	XHTML table Text file
Email address (optional)

Supported by a contract from the National Institute of Allergy and Infectious Diseases, a component of the National Institutes of Health in the Department of Health and Human Services.