IEDB Analysis Resource
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MHC-I Binding Predictions
Prediction Method Version
2013-02-22 [
Older versions
]
Specify Sequence(s)
Enter protein sequence(s) in FASTA format
or as whitespace-separated sequences.
(Browse for sequences in NCBI)
Or select file containing sequence(s)
Choose a Prediction Method
Prediction Method
Show all the method versions:
IEDB recommended 2.22
IEDB recommended 2.19
IEDB recommended 2.18
Consensus
NetMHCpan EL 4.0
NetMHCpan BA 4.0
NetMHCpan 2.8
NetMHCpan 3.0
ANN 4.0
ANN 3.4
SMMPMBEC
SMM
CombLib_Sidney2008
PickPocket
netMHCcons
netMHCstabpan
Help on prediction method selections
Specify what to make binding predictions for
MHC source species
Show only frequently occuring alleles:
Select MHC allele(s)
(Specify MHC allele sequence)
Select HLA allele reference set
:
Allele
Length
Upload allele file
Paste a single full length MHC protein sequence in
FASTA
format:
Peptide length:
--choose--
8
9
10
11
12
13
14
Specify Output
Sort peptides by
Show
All predictions
IC50 below [cutoff] nM
Percent rank below [cutoff]
cutoff
Output format
XHTML table
Text file
Email address (optional)