IEDB Analysis Resource
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Example
Reference
MHC-II binding predictions
Specify Sequence(s)
Enter protein sequence(s)
(Browse for sequences in NCBI)
Or select file containing sequence(s)
Choose sequence format
auto detect format
Space separated sequences
One sequence (ignores spaces)
FASTA format
Choose a Prediction Method
Prediction Method
Consensus
arb
smm_align
Sturniolo
Help on prediction method selections
Specify what to make binding predictions for
MHC allele
HLA DRB1*0101
HLA DRB1*0102
HLA DRB1*0301
HLA DRB1*0305
HLA DRB1*0306
HLA DRB1*0307
HLA DRB1*0308
HLA DRB1*0309
HLA DRB1*0311
HLA DRB1*0401
HLA DRB1*0402
HLA DRB1*0404
HLA DRB1*0405
HLA DRB1*0408
HLA DRB1*0410
HLA DRB1*0421
HLA DRB1*0423
HLA DRB1*0426
HLA DRB1*0701
HLA DRB1*0703
HLA DRB1*0801
HLA DRB1*0802
HLA DRB1*0804
HLA DRB1*0806
HLA DRB1*0813
HLA DRB1*0817
HLA DRB1*0901
HLA DRB1*1101
HLA DRB1*1102
HLA DRB1*1104
HLA DRB1*1106
HLA DRB1*1107
HLA DRB1*1114
HLA DRB1*1120
HLA DRB1*1121
HLA DRB1*1128
HLA DRB1*1301
HLA DRB1*1302
HLA DRB1*1304
HLA DRB1*1305
HLA DRB1*1307
HLA DRB1*1311
HLA DRB1*1321
HLA DRB1*1322
HLA DRB1*1323
HLA DRB1*1327
HLA DRB1*1328
HLA DRB1*1501
HLA DRB1*1502
HLA DRB1*1506
HLA DRB3*0101
HLA DRB4*0101
HLA DRB5*0101
HLA DRB5*0105
H2-IAb
H2-IAd
H2-IAs
Specify Output
Sort peptides by
Position in sequence
MHC prediction score
Output format
XHTML table
Text file
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